Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTF1Q92541 AC016734.2-201ENST00000624325 1377 ntBASIC24.16■■□□□ 1.46
RTF1Q92541 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RTF1Q92541 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.16■■□□□ 1.46
RTF1Q92541 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 TSPY22P-201ENST00000427496 604 ntBASIC24.16■■□□□ 1.46
RTF1Q92541 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.16■■□□□ 1.46
RTF1Q92541 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.16■■□□□ 1.46
RTF1Q92541 KRT8P26-201ENST00000534154 1276 ntBASIC24.16■■□□□ 1.46
RTF1Q92541 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.16■■□□□ 1.46
RTF1Q92541 RNF126P1-202ENST00000569893 925 ntBASIC24.16■■□□□ 1.46
RTF1Q92541 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.16■■□□□ 1.46
RTF1Q92541 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.16■■□□□ 1.46
RTF1Q92541 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC24.16■■□□□ 1.46
RTF1Q92541 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RTF1Q92541 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTF1Q92541 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 AP003733.1-201ENST00000491725 852 ntBASIC24.15■■□□□ 1.46
RTF1Q92541 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.15■■□□□ 1.46
RTF1Q92541 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 NPAP1P7-201ENST00000613027 823 ntBASIC24.15■■□□□ 1.46
RTF1Q92541 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RTF1Q92541 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.15■■□□□ 1.46
RTF1Q92541 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
RTF1Q92541 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTF1Q92541 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RTF1Q92541 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24.14■■□□□ 1.46
RTF1Q92541 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.14■■□□□ 1.46
RTF1Q92541 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
RTF1Q92541 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC24.14■■□□□ 1.45
RTF1Q92541 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 KRT18P48-201ENST00000434763 852 ntBASIC24.14■■□□□ 1.45
RTF1Q92541 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
RTF1Q92541 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RTF1Q92541 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTF1Q92541 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.13■■□□□ 1.45
RTF1Q92541 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.13■■□□□ 1.45
RTF1Q92541 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RTF1Q92541 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
RTF1Q92541 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.13■■□□□ 1.45
RTF1Q92541 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.13■■□□□ 1.45
RTF1Q92541 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC24.13■■□□□ 1.45
RTF1Q92541 AC024563.2-201ENST00000603282 481 ntBASIC24.13■■□□□ 1.45
RTF1Q92541 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 AC092119.3-201ENST00000612618 583 ntBASIC24.13■■□□□ 1.45
RTF1Q92541 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.13■■□□□ 1.45
RTF1Q92541 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RTF1Q92541 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTF1Q92541 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.12■■□□□ 1.45
RTF1Q92541 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms