Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 CCR12P-201ENST00000446203 998 ntBASIC18.77■□□□□ 0.6
PTCD2Q8WV60 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 AC128688.1-201ENST00000487626 519 ntBASIC18.77■□□□□ 0.6
PTCD2Q8WV60 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 AP003041.3-201ENST00000527151 707 ntBASIC18.77■□□□□ 0.6
PTCD2Q8WV60 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 AL353719.1-201ENST00000566847 864 ntBASIC18.77■□□□□ 0.6
PTCD2Q8WV60 AC008622.2-201ENST00000617006 1229 ntBASIC18.77■□□□□ 0.6
PTCD2Q8WV60 AC006011.2-201ENST00000621313 1158 ntBASIC18.77■□□□□ 0.6
PTCD2Q8WV60 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTCD2Q8WV60 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PTCD2Q8WV60 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTCD2Q8WV60 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.77■□□□□ 0.59
PTCD2Q8WV60 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.77■□□□□ 0.59
PTCD2Q8WV60 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 AL023284.2-201ENST00000405850 579 ntBASIC18.76■□□□□ 0.59
PTCD2Q8WV60 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 MCCD1P1-208ENST00000445732 328 ntBASIC18.76■□□□□ 0.59
PTCD2Q8WV60 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 MIR4674-201ENST00000582457 87 ntBASIC18.76■□□□□ 0.59
PTCD2Q8WV60 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 AL499627.1-201ENST00000569373 2188 ntBASIC18.76■□□□□ 0.59
PTCD2Q8WV60 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCD2Q8WV60 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 AC008556.1-201ENST00000610908 2040 ntBASIC18.75■□□□□ 0.59
PTCD2Q8WV60 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 AP000593.1-201ENST00000393668 712 ntBASIC18.75■□□□□ 0.59
PTCD2Q8WV60 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 RN7SL832P-201ENST00000607781 1756 ntBASIC18.75■□□□□ 0.59
PTCD2Q8WV60 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCD2Q8WV60 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCD2Q8WV60 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCD2Q8WV60 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCD2Q8WV60 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCD2Q8WV60 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
PTCD2Q8WV60 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms