Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 AL020996.1-203ENST00000536896 2307 ntBASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 AC104581.1-202ENST00000635932 2618 ntBASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 NEK4P2-201ENST00000580004 1012 ntBASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 NPAP1P7-201ENST00000613027 823 ntBASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 AC004263.2-201ENST00000617183 678 ntBASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.93■■□□□ 1.1
NKX2-3Q8TAU0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 KRT18P23-201ENST00000435622 1283 ntBASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 SPDYE13P-201ENST00000445314 798 ntBASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NKX2-3Q8TAU0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 LINC01311-201ENST00000565162 1445 ntBASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 STARP1-201ENST00000397973 869 ntBASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 AC092597.1-201ENST00000487352 616 ntBASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 AL157888.1-201ENST00000631930 593 ntBASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
NKX2-3Q8TAU0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NKX2-3Q8TAU0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms