Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 ADGRE4P-201ENST00000597372 1810 ntBASIC11.61□□□□□ -0.55
SVIPQ8NHG7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 AL359649.1-201ENST00000607406 1741 ntBASIC11.6□□□□□ -0.55
SVIPQ8NHG7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 AC005089.1-201ENST00000619486 2241 ntBASIC11.6□□□□□ -0.55
SVIPQ8NHG7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 CCT7P1-201ENST00000406551 1611 ntBASIC11.6□□□□□ -0.55
SVIPQ8NHG7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SVIPQ8NHG7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SVIPQ8NHG7 CICP3-201ENST00000440782 2455 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms