Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CHPFQ8IZ52 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 MIR3180-1-201ENST00000580374 94 ntBASIC18.86■□□□□ 0.61
CHPFQ8IZ52 MIR3180-3-201ENST00000584616 94 ntBASIC18.86■□□□□ 0.61
CHPFQ8IZ52 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 AC006333.2-201ENST00000607957 2099 ntBASIC18.86■□□□□ 0.61
CHPFQ8IZ52 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.86■□□□□ 0.61
CHPFQ8IZ52 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 KRT18P1-202ENST00000452408 1331 ntBASIC18.85■□□□□ 0.61
CHPFQ8IZ52 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 RNF126P1-202ENST00000569893 925 ntBASIC18.85■□□□□ 0.61
CHPFQ8IZ52 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHPFQ8IZ52 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.84■□□□□ 0.61
CHPFQ8IZ52 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms