Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM48Q8IWZ4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 KRT18P23-201ENST00000435622 1283 ntBASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM48Q8IWZ4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 STARP1-201ENST00000397973 869 ntBASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 MYC-208ENST00000641036 567 ntBASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 AL161938.1-201ENST00000569833 2180 ntBASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM48Q8IWZ4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 AL031133.1-201ENST00000406807 723 ntBASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 AC112907.2-201ENST00000448639 330 ntBASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 KRT18P38-201ENST00000449496 1282 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms