Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 B3GAT3P1-201ENST00000471720 806 ntBASIC17.39■□□□□ 0.37
CCDC71Q8IV32 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 AC126763.1-201ENST00000552015 2118 ntBASIC17.39■□□□□ 0.37
CCDC71Q8IV32 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 AC073508.3-201ENST00000619697 1419 ntBASIC17.38■□□□□ 0.37
CCDC71Q8IV32 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 AIRN-201ENST00000601203 4374 ntBASIC17.38■□□□□ 0.37
CCDC71Q8IV32 AC008764.6-201ENST00000595909 2069 ntBASIC17.38■□□□□ 0.37
CCDC71Q8IV32 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 CRYGFP-201ENST00000418459 633 ntBASIC17.38■□□□□ 0.37
CCDC71Q8IV32 KRT18P16-201ENST00000510337 1294 ntBASIC17.38■□□□□ 0.37
CCDC71Q8IV32 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 AC026271.3-201ENST00000571884 352 ntBASIC17.38■□□□□ 0.37
CCDC71Q8IV32 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC71Q8IV32 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC004980.1-204ENST00000429707 299 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC104076.2-201ENST00000448912 469 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 ECEL1P2-202ENST00000465689 757 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC097488.1-201ENST00000507834 756 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC010203.1-204ENST00000548782 407 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 C2orf69P3-201ENST00000565542 1120 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC131212.4-201ENST00000623606 975 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 AC073592.3-201ENST00000625118 1834 ntBASIC17.37■□□□□ 0.37
CCDC71Q8IV32 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC71Q8IV32 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms