Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC28Q86X40 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 RARRES2P10-201ENST00000564312 460 ntBASIC16.52■□□□□ 0.24
LRRC28Q86X40 Z99916.2-201ENST00000604037 246 ntBASIC16.52■□□□□ 0.24
LRRC28Q86X40 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRRC28Q86X40 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC28Q86X40 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC28Q86X40 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC28Q86X40 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC28Q86X40 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 RPS2P55-201ENST00000397318 883 ntBASIC16.51■□□□□ 0.23
LRRC28Q86X40 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 AC107956.1-201ENST00000494359 873 ntBASIC16.51■□□□□ 0.23
LRRC28Q86X40 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 AP001412.1-201ENST00000608405 714 ntBASIC16.51■□□□□ 0.23
LRRC28Q86X40 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC28Q86X40 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC28Q86X40 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AP006587.1-201ENST00000534129 1502 ntBASIC16.5■□□□□ 0.23
LRRC28Q86X40 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AC012618.2-201ENST00000428058 849 ntBASIC16.5■□□□□ 0.23
LRRC28Q86X40 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AC233702.5-201ENST00000584107 538 ntBASIC16.5■□□□□ 0.23
LRRC28Q86X40 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms