Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 AL355075.4-201ENST00000554988 638 ntBASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 AL353719.1-201ENST00000566847 864 ntBASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 MIR4497-201ENST00000583208 89 ntBASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 AC135050.7-201ENST00000624508 2218 ntBASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 MIR3180-5-201ENST00000583743 153 ntBASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST2H3AQ71DI3 AC092338.2-201ENST00000568827 1415 ntBASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 AP000593.1-201ENST00000393668 712 ntBASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 MYLKP1-201ENST00000509077 1580 ntBASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST2H3AQ71DI3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 LTB4R2-202ENST00000528054 3092 ntBASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 AC034236.2-201ENST00000606662 1610 ntBASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 AL162741.1-201ENST00000565563 1558 ntBASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H3AQ71DI3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms