Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDHR3Q6ZTQ4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDHR3Q6ZTQ4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDHR3Q6ZTQ4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDHR3Q6ZTQ4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 AC004980.1-204ENST00000429707 299 ntBASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 RBM17P1-201ENST00000453646 1190 ntBASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 Z85996.1-201ENST00000494644 937 ntBASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 AC116562.2-201ENST00000507042 360 ntBASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
CDHR3Q6ZTQ4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDHR3Q6ZTQ4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 KRT8P32-201ENST00000512863 1461 ntBASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 AC211429.1-201ENST00000415277 523 ntBASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 AC026271.3-201ENST00000571884 352 ntBASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 AC131212.4-201ENST00000623606 975 ntBASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDHR3Q6ZTQ4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms