Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.56■□□□□ 0.56
BRAT1Q6PJG6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 AP000974.1-201ENST00000623909 2387 ntBASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 FAM86EP-206ENST00000510506 987 ntBASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 AC091076.1-201ENST00000610741 619 ntBASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 AC079602.3-201ENST00000623931 403 ntBASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 AL391807.1-203ENST00000604392 2365 ntBASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRAT1Q6PJG6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 VENTXP5-201ENST00000523979 775 ntBASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRAT1Q6PJG6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 CROCCP3-202ENST00000420820 1947 ntBASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 MIR149-201ENST00000384879 89 ntBASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
BRAT1Q6PJG6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 PCED1CP-201ENST00000419887 785 ntBASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 SPDYE13P-201ENST00000445314 798 ntBASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 AL358472.4-201ENST00000633140 710 ntBASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 AP000550.4-202ENST00000639755 178 ntBASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRAT1Q6PJG6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms