Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 UNC93B2-201ENST00000285383 730 ntBASIC16.91■□□□□ 0.3
NIPAL3Q6P499 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 AL596275.1-201ENST00000423464 877 ntBASIC16.91■□□□□ 0.3
NIPAL3Q6P499 AC097488.1-201ENST00000507834 756 ntBASIC16.91■□□□□ 0.3
NIPAL3Q6P499 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPAL3Q6P499 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.9■□□□□ 0.3
NIPAL3Q6P499 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPAL3Q6P499 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NIPAL3Q6P499 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NIPAL3Q6P499 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.3
NIPAL3Q6P499 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 CRYGFP-201ENST00000418459 633 ntBASIC16.89■□□□□ 0.29
NIPAL3Q6P499 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 RBM17P1-201ENST00000453646 1190 ntBASIC16.89■□□□□ 0.29
NIPAL3Q6P499 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 AL355075.4-201ENST00000554988 638 ntBASIC16.89■□□□□ 0.29
NIPAL3Q6P499 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 CKBP1-201ENST00000565489 1086 ntBASIC16.89■□□□□ 0.29
NIPAL3Q6P499 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
NIPAL3Q6P499 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 MFAP1P1-201ENST00000442257 1255 ntBASIC16.88■□□□□ 0.29
NIPAL3Q6P499 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms