Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LGSNQ5TDP6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LGSNQ5TDP6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AL357033.4-201ENST00000617703 1807 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 LTB4R2-202ENST00000528054 3092 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 KRT17P3-201ENST00000420566 1262 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 UNC93B5-201ENST00000530315 699 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC098934.4-201ENST00000564127 592 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AL109923.1-201ENST00000618799 583 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC131212.4-201ENST00000623606 975 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 KRT8P11-201ENST00000409686 1436 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC067852.2-201ENST00000590513 2313 ntBASIC18.72■□□□□ 0.59
LGSNQ5TDP6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LGSNQ5TDP6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LGSNQ5TDP6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 KRT16P5-201ENST00000455284 522 ntBASIC18.7■□□□□ 0.58
LGSNQ5TDP6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LGSNQ5TDP6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms