Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.96■□□□□ 0.46
ATP6AP1LQ52LC2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 AC006058.3-201ENST00000606217 1069 ntBASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 AC011298.2-201ENST00000617989 482 ntBASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 AL031985.4-201ENST00000642138 673 ntBASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 AC135776.1-201ENST00000319817 2481 ntBASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP6AP1LQ52LC2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CKBP1-201ENST00000565489 1086 ntBASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP6AP1LQ52LC2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 CR392000.1-201ENST00000624770 1228 ntBASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATP6AP1LQ52LC2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms