Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO4Q2I0M5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 HOXB1-202ENST00000577092 1414 ntBASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 AC254562.1-201ENST00000417586 456 ntBASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO4Q2I0M5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 AC073314.1-201ENST00000568729 2216 ntBASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 AC092474.2-201ENST00000424288 719 ntBASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 AC005336.2-201ENST00000593183 939 ntBASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO4Q2I0M5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 MIR4469-201ENST00000583919 79 ntBASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO4Q2I0M5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 TP73-AS1-210ENST00000637775 1455 ntBASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 AC104417.2-201ENST00000562989 1793 ntBASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 CNN2P11-201ENST00000429351 262 ntBASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 AC008735.5-201ENST00000623544 497 ntBASIC17.9■□□□□ 0.46
RSPO4Q2I0M5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.89■□□□□ 0.46
RSPO4Q2I0M5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
RSPO4Q2I0M5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms