Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX4P78413 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 AL138781.2-201ENST00000617896 1843 ntBASIC19.28■□□□□ 0.68
IRX4P78413 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX4P78413 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX4P78413 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.28■□□□□ 0.68
IRX4P78413 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX4P78413 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IRX4P78413 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX4P78413 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.28■□□□□ 0.68
IRX4P78413 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX4P78413 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.28■□□□□ 0.68
IRX4P78413 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
IRX4P78413 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 IER3-202ENST00000376377 1350 ntBASIC19.28■□□□□ 0.68
IRX4P78413 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 AC096733.2-201ENST00000609937 1394 ntBASIC19.28■□□□□ 0.68
IRX4P78413 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX4P78413 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX4P78413 AC006333.2-201ENST00000607957 2099 ntBASIC19.28■□□□□ 0.68
IRX4P78413 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX4P78413 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX4P78413 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
IRX4P78413 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.27■□□□□ 0.68
IRX4P78413 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.27■□□□□ 0.68
IRX4P78413 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.27■□□□□ 0.68
IRX4P78413 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX4P78413 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
IRX4P78413 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX4P78413 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
IRX4P78413 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
IRX4P78413 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
IRX4P78413 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IRX4P78413 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
IRX4P78413 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
IRX4P78413 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 AL450487.1-201ENST00000426799 995 ntBASIC19.26■□□□□ 0.67
IRX4P78413 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.26■□□□□ 0.67
IRX4P78413 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.26■□□□□ 0.67
IRX4P78413 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX4P78413 HLA-A-209ENST00000638375 975 ntBASIC19.26■□□□□ 0.67
IRX4P78413 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX4P78413 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
IRX4P78413 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX4P78413 AC092338.2-201ENST00000568827 1415 ntBASIC19.25■□□□□ 0.67
IRX4P78413 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
IRX4P78413 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
IRX4P78413 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IRX4P78413 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
IRX4P78413 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.25■□□□□ 0.67
IRX4P78413 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.25■□□□□ 0.67
IRX4P78413 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms