Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRA2BP62995 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
TRA2BP62995 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.49■□□□□ 0.39
TRA2BP62995 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRA2BP62995 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRA2BP62995 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.49■□□□□ 0.39
TRA2BP62995 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
TRA2BP62995 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.49■□□□□ 0.39
TRA2BP62995 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.49■□□□□ 0.39
TRA2BP62995 FAM87A-204ENST00000613235 858 ntBASIC17.49■□□□□ 0.39
TRA2BP62995 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.49■□□□□ 0.39
TRA2BP62995 AC009102.3-201ENST00000623118 1491 ntBASIC17.49■□□□□ 0.39
TRA2BP62995 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 AL390961.4-201ENST00000623958 2535 ntBASIC17.49■□□□□ 0.39
TRA2BP62995 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRA2BP62995 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRA2BP62995 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRA2BP62995 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.48■□□□□ 0.39
TRA2BP62995 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRA2BP62995 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRA2BP62995 RNF165-205ENST00000588679 2904 ntBASIC17.48■□□□□ 0.39
TRA2BP62995 KRT18P22-201ENST00000402024 1347 ntBASIC17.47■□□□□ 0.39
TRA2BP62995 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.47■□□□□ 0.39
TRA2BP62995 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
TRA2BP62995 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.47■□□□□ 0.39
TRA2BP62995 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
TRA2BP62995 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.47■□□□□ 0.39
TRA2BP62995 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
TRA2BP62995 NEK4P2-201ENST00000580004 1012 ntBASIC17.47■□□□□ 0.39
TRA2BP62995 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 LINC01568-207ENST00000641790 1380 ntBASIC17.47■□□□□ 0.39
TRA2BP62995 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 GMCL1P1-201ENST00000463439 1581 ntBASIC17.47■□□□□ 0.39
TRA2BP62995 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.47■□□□□ 0.39
TRA2BP62995 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRA2BP62995 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRA2BP62995 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRA2BP62995 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRA2BP62995 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
TRA2BP62995 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRA2BP62995 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms