Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB1AP62820 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB1AP62820 Z98044.1-201ENST00000632503 1764 ntBASIC16.3■□□□□ 0.2
RAB1AP62820 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RAB1AP62820 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
RAB1AP62820 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RAB1AP62820 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB1AP62820 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB1AP62820 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB1AP62820 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RAB1AP62820 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB1AP62820 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB1AP62820 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB1AP62820 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RAB1AP62820 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB1AP62820 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB1AP62820 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB1AP62820 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RAB1AP62820 AC093503.3-201ENST00000624917 2352 ntBASIC16.29■□□□□ 0.2
RAB1AP62820 AC093525.10-201ENST00000625130 1569 ntBASIC16.29■□□□□ 0.2
RAB1AP62820 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB1AP62820 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB1AP62820 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RAB1AP62820 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 AC005521.1-201ENST00000393351 872 ntBASIC16.28■□□□□ 0.2
RAB1AP62820 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB1AP62820 AC010203.1-204ENST00000548782 407 ntBASIC16.28■□□□□ 0.2
RAB1AP62820 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB1AP62820 AL031598.1-201ENST00000561511 1773 ntBASIC16.28■□□□□ 0.2
RAB1AP62820 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB1AP62820 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RAB1AP62820 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB1AP62820 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB1AP62820 AC034236.2-201ENST00000606662 1610 ntBASIC16.27■□□□□ 0.2
RAB1AP62820 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RAB1AP62820 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB1AP62820 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
RAB1AP62820 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms