Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
UBE2D3P61077 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
UBE2D3P61077 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.21□□□□□ -0.29
UBE2D3P61077 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 AC073592.3-201ENST00000625118 1834 ntBASIC13.21□□□□□ -0.29
UBE2D3P61077 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
UBE2D3P61077 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.21□□□□□ -0.29
UBE2D3P61077 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.21□□□□□ -0.29
UBE2D3P61077 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
UBE2D3P61077 AC073648.6-201ENST00000641589 218 ntBASIC13.21□□□□□ -0.29
UBE2D3P61077 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.21□□□□□ -0.29
UBE2D3P61077 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.21□□□□□ -0.29
UBE2D3P61077 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D3P61077 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
UBE2D3P61077 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
UBE2D3P61077 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.21□□□□□ -0.3
UBE2D3P61077 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.21□□□□□ -0.3
UBE2D3P61077 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.21□□□□□ -0.3
UBE2D3P61077 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
UBE2D3P61077 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.21□□□□□ -0.3
UBE2D3P61077 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.21□□□□□ -0.3
UBE2D3P61077 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.21□□□□□ -0.3
UBE2D3P61077 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBE2D3P61077 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 HTR7P1-201ENST00000538670 1336 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.2□□□□□ -0.3
UBE2D3P61077 AL353807.1-201ENST00000427475 662 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 KSR1P1-201ENST00000446298 240 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.2□□□□□ -0.3
UBE2D3P61077 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 AC006058.3-201ENST00000606217 1069 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 AC068587.9-201ENST00000641814 219 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
UBE2D3P61077 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms