Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.94■□□□□ 0.14
AP3S2P59780 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 KRT18P14-201ENST00000534205 1250 ntBASIC15.94■□□□□ 0.14
AP3S2P59780 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.94■□□□□ 0.14
AP3S2P59780 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.94■□□□□ 0.14
AP3S2P59780 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 TNRC18P3-201ENST00000441896 2691 ntBASIC15.94■□□□□ 0.14
AP3S2P59780 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
AP3S2P59780 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
AP3S2P59780 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.93■□□□□ 0.14
AP3S2P59780 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.93■□□□□ 0.14
AP3S2P59780 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 SUDS3P1-201ENST00000505831 966 ntBASIC15.93■□□□□ 0.14
AP3S2P59780 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
AP3S2P59780 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.93■□□□□ 0.14
AP3S2P59780 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.93■□□□□ 0.14
AP3S2P59780 REXO1L9P-201ENST00000604264 2108 ntBASIC15.93■□□□□ 0.14
AP3S2P59780 AC069236.1-201ENST00000604339 616 ntBASIC15.93■□□□□ 0.14
AP3S2P59780 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP3S2P59780 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.93■□□□□ 0.14
AP3S2P59780 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP3S2P59780 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP3S2P59780 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.92■□□□□ 0.14
AP3S2P59780 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3S2P59780 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
AP3S2P59780 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.92■□□□□ 0.14
AP3S2P59780 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
AP3S2P59780 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP3S2P59780 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.92■□□□□ 0.14
AP3S2P59780 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3S2P59780 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP3S2P59780 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
AP3S2P59780 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 AC108860.2-201ENST00000562760 2183 ntBASIC15.92■□□□□ 0.14
AP3S2P59780 AL499627.1-201ENST00000569373 2188 ntBASIC15.92■□□□□ 0.14
AP3S2P59780 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3S2P59780 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.91■□□□□ 0.14
AP3S2P59780 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP3S2P59780 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
AP3S2P59780 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3S2P59780 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms