Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CLDN20P56880 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN20P56880 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17■□□□□ 0.31
CLDN20P56880 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
CLDN20P56880 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CLDN20P56880 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN20P56880 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLDN20P56880 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17■□□□□ 0.31
CLDN20P56880 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CLDN20P56880 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN20P56880 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 AL161938.1-201ENST00000569833 2180 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN20P56880 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 AL354751.1-201ENST00000412768 1863 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN20P56880 AC073508.3-201ENST00000619697 1419 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN20P56880 LIN28AP1-201ENST00000429574 405 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 ATP5G1P1-201ENST00000448724 379 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 MIR4674-201ENST00000582457 87 ntBASIC16.99■□□□□ 0.31
CLDN20P56880 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN20P56880 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.99■□□□□ 0.31
CLDN20P56880 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN20P56880 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN20P56880 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN20P56880 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CLDN20P56880 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN20P56880 BICD1-207ENST00000551848 1962 ntBASIC16.98■□□□□ 0.31
CLDN20P56880 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN20P56880 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 KRT8P3-201ENST00000519669 1449 ntBASIC16.98■□□□□ 0.31
CLDN20P56880 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLDN20P56880 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN20P56880 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN20P56880 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN20P56880 AC092865.7-201ENST00000641832 219 ntBASIC16.98■□□□□ 0.31
CLDN20P56880 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN20P56880 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN20P56880 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms