Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC008040.2-201ENST00000461049 708 ntBASIC16.95■□□□□ 0.3
HMGA2P52926 RPS2P4-201ENST00000476944 856 ntBASIC16.95■□□□□ 0.3
HMGA2P52926 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMGA2P52926 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HMGA2P52926 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMGA2P52926 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGA2P52926 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGA2P52926 GMCL1P1-201ENST00000463439 1581 ntBASIC16.94■□□□□ 0.3
HMGA2P52926 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGA2P52926 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 PRORSD1P-202ENST00000563365 2154 ntBASIC16.94■□□□□ 0.3
HMGA2P52926 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.94■□□□□ 0.3
HMGA2P52926 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGA2P52926 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.94■□□□□ 0.3
HMGA2P52926 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGA2P52926 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA2P52926 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA2P52926 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA2P52926 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGA2P52926 PHGDH-209ENST00000641074 1780 ntBASIC16.93■□□□□ 0.3
HMGA2P52926 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HMGA2P52926 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGA2P52926 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
HMGA2P52926 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGA2P52926 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGA2P52926 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGA2P52926 AC026271.3-201ENST00000571884 352 ntBASIC16.93■□□□□ 0.3
HMGA2P52926 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA2P52926 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HMGA2P52926 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGA2P52926 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGA2P52926 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA2P52926 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGA2P52926 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HMGA2P52926 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGA2P52926 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGA2P52926 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGA2P52926 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.92■□□□□ 0.3
HMGA2P52926 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 AC008622.2-201ENST00000617006 1229 ntBASIC16.92■□□□□ 0.3
HMGA2P52926 AC011298.2-201ENST00000617989 482 ntBASIC16.92■□□□□ 0.3
HMGA2P52926 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGA2P52926 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.92■□□□□ 0.3
HMGA2P52926 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms