Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.39■□□□□ 0.37
SMSP52788 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMSP52788 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMSP52788 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMSP52788 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
SMSP52788 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.38■□□□□ 0.37
SMSP52788 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
SMSP52788 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SMSP52788 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.38■□□□□ 0.37
SMSP52788 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.38■□□□□ 0.37
SMSP52788 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.38■□□□□ 0.37
SMSP52788 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SMSP52788 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 KRT18P16-201ENST00000510337 1294 ntBASIC17.38■□□□□ 0.37
SMSP52788 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.38■□□□□ 0.37
SMSP52788 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.38■□□□□ 0.37
SMSP52788 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMSP52788 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 FEM1AP3-201ENST00000403722 1741 ntBASIC17.38■□□□□ 0.37
SMSP52788 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMSP52788 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
SMSP52788 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.38■□□□□ 0.37
SMSP52788 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMSP52788 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.38■□□□□ 0.37
SMSP52788 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.38■□□□□ 0.37
SMSP52788 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SMSP52788 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.37■□□□□ 0.37
SMSP52788 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 BICD1-207ENST00000551848 1962 ntBASIC17.37■□□□□ 0.37
SMSP52788 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.37■□□□□ 0.37
SMSP52788 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 UPK3BP1-201ENST00000428678 509 ntBASIC17.37■□□□□ 0.37
SMSP52788 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMSP52788 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.37■□□□□ 0.37
SMSP52788 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.37■□□□□ 0.37
SMSP52788 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.37■□□□□ 0.37
SMSP52788 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.37■□□□□ 0.37
SMSP52788 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMSP52788 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMSP52788 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMSP52788 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMSP52788 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SMSP52788 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SMSP52788 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 AC063952.2-201ENST00000498792 1227 ntBASIC17.36■□□□□ 0.37
SMSP52788 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 AP000692.2-201ENST00000608391 879 ntBASIC17.36■□□□□ 0.37
SMSP52788 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMSP52788 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.36■□□□□ 0.37
SMSP52788 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.36■□□□□ 0.37
SMSP52788 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms