Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.42■□□□□ 0.38
CLK1P49759 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.42■□□□□ 0.38
CLK1P49759 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 AL160286.2-201ENST00000567150 934 ntBASIC17.42■□□□□ 0.38
CLK1P49759 AP001412.1-201ENST00000608405 714 ntBASIC17.42■□□□□ 0.38
CLK1P49759 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.42■□□□□ 0.38
CLK1P49759 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLK1P49759 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLK1P49759 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CLK1P49759 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLK1P49759 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.41■□□□□ 0.38
CLK1P49759 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK1P49759 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK1P49759 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLK1P49759 AL158047.1-201ENST00000445918 881 ntBASIC17.41■□□□□ 0.38
CLK1P49759 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.41■□□□□ 0.38
CLK1P49759 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK1P49759 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.41■□□□□ 0.38
CLK1P49759 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK1P49759 AC073195.1-201ENST00000607241 877 ntBASIC17.41■□□□□ 0.38
CLK1P49759 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK1P49759 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.41■□□□□ 0.38
CLK1P49759 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.41■□□□□ 0.38
CLK1P49759 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.41■□□□□ 0.38
CLK1P49759 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.41■□□□□ 0.38
CLK1P49759 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLK1P49759 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLK1P49759 AC093525.10-201ENST00000625130 1569 ntBASIC17.4■□□□□ 0.38
CLK1P49759 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 AC141586.3-201ENST00000562166 1838 ntBASIC17.4■□□□□ 0.38
CLK1P49759 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.4■□□□□ 0.38
CLK1P49759 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.4■□□□□ 0.38
CLK1P49759 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.4■□□□□ 0.38
CLK1P49759 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLK1P49759 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.4■□□□□ 0.38
CLK1P49759 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 AF186192.3-201ENST00000583427 947 ntBASIC17.4■□□□□ 0.38
CLK1P49759 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 AC131212.4-201ENST00000623606 975 ntBASIC17.4■□□□□ 0.38
CLK1P49759 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLK1P49759 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.4■□□□□ 0.38
CLK1P49759 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK1P49759 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK1P49759 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms