Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL136038.4-201ENST00000603606 1261 ntBASIC20.05■□□□□ 0.8
TNFSF9P41273 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.05■□□□□ 0.8
TNFSF9P41273 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.05■□□□□ 0.8
TNFSF9P41273 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF9P41273 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF9P41273 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.04■□□□□ 0.8
TNFSF9P41273 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF9P41273 MIR3180-4-201ENST00000582223 153 ntBASIC20.04■□□□□ 0.8
TNFSF9P41273 AL121956.5-201ENST00000625261 221 ntBASIC20.04■□□□□ 0.8
TNFSF9P41273 AL358472.4-201ENST00000633140 710 ntBASIC20.04■□□□□ 0.8
TNFSF9P41273 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TNFSF9P41273 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TNFSF9P41273 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF9P41273 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TNFSF9P41273 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.04■□□□□ 0.8
TNFSF9P41273 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 AC005332.1-201ENST00000577698 1310 ntBASIC20.03■□□□□ 0.8
TNFSF9P41273 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF9P41273 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF9P41273 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF9P41273 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TNFSF9P41273 HLA-F-220ENST00000434407 884 ntBASIC20.03■□□□□ 0.8
TNFSF9P41273 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TNFSF9P41273 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF9P41273 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TNFSF9P41273 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF9P41273 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
TNFSF9P41273 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF9P41273 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
TNFSF9P41273 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF9P41273 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF9P41273 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TNFSF9P41273 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.02■□□□□ 0.8
TNFSF9P41273 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TNFSF9P41273 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.02■□□□□ 0.8
TNFSF9P41273 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF9P41273 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF9P41273 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.02■□□□□ 0.79
TNFSF9P41273 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF9P41273 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF9P41273 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.02■□□□□ 0.79
TNFSF9P41273 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF9P41273 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
TNFSF9P41273 PCED1CP-201ENST00000419887 785 ntBASIC20.01■□□□□ 0.79
TNFSF9P41273 PVRIG2P-201ENST00000435460 978 ntBASIC20.01■□□□□ 0.79
TNFSF9P41273 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.01■□□□□ 0.79
TNFSF9P41273 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.01■□□□□ 0.79
TNFSF9P41273 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.01■□□□□ 0.79
TNFSF9P41273 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.01■□□□□ 0.79
TNFSF9P41273 SDHAP2-201ENST00000455183 2001 ntBASIC20.01■□□□□ 0.79
TNFSF9P41273 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TNFSF9P41273 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TNFSF9P41273 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms