Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC005332.7-201ENST00000614046 2005 ntBASIC18.16■□□□□ 0.5
CDH3P22223 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CDH3P22223 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH3P22223 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 KRT8P3-201ENST00000519669 1449 ntBASIC18.15■□□□□ 0.5
CDH3P22223 FEM1AP3-201ENST00000403722 1741 ntBASIC18.15■□□□□ 0.5
CDH3P22223 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDH3P22223 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH3P22223 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH3P22223 IRX1P1-201ENST00000438849 1838 ntBASIC18.15■□□□□ 0.5
CDH3P22223 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
CDH3P22223 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDH3P22223 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH3P22223 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH3P22223 KRT18P35-201ENST00000510488 1269 ntBASIC18.15■□□□□ 0.5
CDH3P22223 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH3P22223 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.15■□□□□ 0.5
CDH3P22223 AL445228.2-201ENST00000605589 952 ntBASIC18.15■□□□□ 0.5
CDH3P22223 AC140113.3-201ENST00000605663 199 ntBASIC18.15■□□□□ 0.5
CDH3P22223 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
CDH3P22223 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH3P22223 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CDH3P22223 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH3P22223 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.14■□□□□ 0.5
CDH3P22223 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.14■□□□□ 0.5
CDH3P22223 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH3P22223 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.14■□□□□ 0.5
CDH3P22223 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH3P22223 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH3P22223 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH3P22223 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH3P22223 ARMC10P1-201ENST00000313754 855 ntBASIC18.14■□□□□ 0.49
CDH3P22223 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.14■□□□□ 0.49
CDH3P22223 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDH3P22223 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 YBX1P2-201ENST00000489612 999 ntBASIC18.14■□□□□ 0.49
CDH3P22223 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.14■□□□□ 0.49
CDH3P22223 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 LINC01238-205ENST00000567549 1107 ntBASIC18.14■□□□□ 0.49
CDH3P22223 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH3P22223 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH3P22223 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 AL031432.5-201ENST00000641059 760 ntBASIC18.14■□□□□ 0.49
CDH3P22223 GPAT2P1-201ENST00000444924 1672 ntBASIC18.14■□□□□ 0.49
CDH3P22223 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDH3P22223 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH3P22223 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH3P22223 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH3P22223 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH3P22223 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH3P22223 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CDH3P22223 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH3P22223 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH3P22223 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.13■□□□□ 0.49
CDH3P22223 RNF152P1-201ENST00000397754 604 ntBASIC18.13■□□□□ 0.49
CDH3P22223 AP000523.1-201ENST00000398242 1049 ntBASIC18.13■□□□□ 0.49
CDH3P22223 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.13■□□□□ 0.49
CDH3P22223 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH3P22223 AC009947.2-201ENST00000444014 672 ntBASIC18.13■□□□□ 0.49
CDH3P22223 MCCD1P1-208ENST00000445732 328 ntBASIC18.13■□□□□ 0.49
CDH3P22223 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH3P22223 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH3P22223 AL023973.1-201ENST00000624619 620 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms