Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.63■□□□□ 0.57
APOA4P06727 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.63■□□□□ 0.57
APOA4P06727 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.63■□□□□ 0.57
APOA4P06727 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA4P06727 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA4P06727 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOA4P06727 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
APOA4P06727 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APOA4P06727 AC126763.1-201ENST00000552015 2118 ntBASIC18.62■□□□□ 0.57
APOA4P06727 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.62■□□□□ 0.57
APOA4P06727 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.62■□□□□ 0.57
APOA4P06727 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.62■□□□□ 0.57
APOA4P06727 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.62■□□□□ 0.57
APOA4P06727 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
APOA4P06727 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.62■□□□□ 0.57
APOA4P06727 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.62■□□□□ 0.57
APOA4P06727 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
APOA4P06727 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.62■□□□□ 0.57
APOA4P06727 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
APOA4P06727 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
APOA4P06727 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.62■□□□□ 0.57
APOA4P06727 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.62■□□□□ 0.57
APOA4P06727 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA4P06727 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.61■□□□□ 0.57
APOA4P06727 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.61■□□□□ 0.57
APOA4P06727 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
APOA4P06727 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.61■□□□□ 0.57
APOA4P06727 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.61■□□□□ 0.57
APOA4P06727 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.61■□□□□ 0.57
APOA4P06727 AL355075.4-201ENST00000554988 638 ntBASIC18.61■□□□□ 0.57
APOA4P06727 AP005242.2-201ENST00000580065 1175 ntBASIC18.61■□□□□ 0.57
APOA4P06727 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.61■□□□□ 0.57
APOA4P06727 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
APOA4P06727 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA4P06727 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
APOA4P06727 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
APOA4P06727 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
APOA4P06727 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.6■□□□□ 0.57
APOA4P06727 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.6■□□□□ 0.57
APOA4P06727 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 AL596275.1-201ENST00000423464 877 ntBASIC18.6■□□□□ 0.57
APOA4P06727 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.6■□□□□ 0.57
APOA4P06727 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.6■□□□□ 0.57
APOA4P06727 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.6■□□□□ 0.57
APOA4P06727 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 AP000525.1-201ENST00000608286 694 ntBASIC18.6■□□□□ 0.57
APOA4P06727 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
APOA4P06727 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA4P06727 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
APOA4P06727 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
APOA4P06727 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 KRT8P3-201ENST00000519669 1449 ntBASIC18.59■□□□□ 0.57
APOA4P06727 AC018470.1-201ENST00000624790 3129 ntBASIC18.59■□□□□ 0.57
APOA4P06727 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOA4P06727 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms