Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 TSPY21P-201ENST00000433481 731 ntBASIC15.2■□□□□ 0.02
SCAF4O95104 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.2■□□□□ 0.02
SCAF4O95104 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.2■□□□□ 0.02
SCAF4O95104 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.2■□□□□ 0.02
SCAF4O95104 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SCAF4O95104 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SCAF4O95104 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.2■□□□□ 0.02
SCAF4O95104 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 AC008764.6-201ENST00000595909 2069 ntBASIC15.2■□□□□ 0.02
SCAF4O95104 TNRC18P3-201ENST00000441896 2691 ntBASIC15.2■□□□□ 0.02
SCAF4O95104 AC092368.3-202ENST00000574180 1591 ntBASIC15.19■□□□□ 0.02
SCAF4O95104 AL139384.1-201ENST00000612143 3047 ntBASIC15.19■□□□□ 0.02
SCAF4O95104 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCAF4O95104 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAF4O95104 SLC25A6P5-201ENST00000435663 894 ntBASIC15.19■□□□□ 0.02
SCAF4O95104 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAF4O95104 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAF4O95104 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.19■□□□□ 0.02
SCAF4O95104 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAF4O95104 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SCAF4O95104 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAF4O95104 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.19■□□□□ 0.02
SCAF4O95104 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAF4O95104 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SCAF4O95104 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
SCAF4O95104 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.18■□□□□ 0.02
SCAF4O95104 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.18■□□□□ 0.02
SCAF4O95104 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAF4O95104 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
SCAF4O95104 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAF4O95104 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAF4O95104 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.17■□□□□ 0.02
SCAF4O95104 AP006587.1-201ENST00000534129 1502 ntBASIC15.17■□□□□ 0.02
SCAF4O95104 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 ESPNP-201ENST00000270691 2015 ntBASIC15.17■□□□□ 0.02
SCAF4O95104 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCAF4O95104 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms