Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL1O75677 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.64■□□□□ 0.57
RFPL1O75677 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL1O75677 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.64■□□□□ 0.57
RFPL1O75677 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFPL1O75677 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.64■□□□□ 0.57
RFPL1O75677 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL1O75677 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
RFPL1O75677 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFPL1O75677 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.64■□□□□ 0.57
RFPL1O75677 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL1O75677 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL1O75677 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFPL1O75677 KRT8P45-201ENST00000414328 1447 ntBASIC18.64■□□□□ 0.57
RFPL1O75677 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL1O75677 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
RFPL1O75677 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 MMP23A-201ENST00000234610 1017 ntBASIC18.63■□□□□ 0.57
RFPL1O75677 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 TMPOP1-202ENST00000424642 1267 ntBASIC18.63■□□□□ 0.57
RFPL1O75677 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.63■□□□□ 0.57
RFPL1O75677 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.63■□□□□ 0.57
RFPL1O75677 AL353708.3-201ENST00000610272 989 ntBASIC18.63■□□□□ 0.57
RFPL1O75677 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 AC112777.1-201ENST00000540175 1423 ntBASIC18.63■□□□□ 0.57
RFPL1O75677 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RFPL1O75677 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL1O75677 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL1O75677 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.62■□□□□ 0.57
RFPL1O75677 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFPL1O75677 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFPL1O75677 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RFPL1O75677 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFPL1O75677 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.62■□□□□ 0.57
RFPL1O75677 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
RFPL1O75677 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.62■□□□□ 0.57
RFPL1O75677 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RFPL1O75677 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL1O75677 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFPL1O75677 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFPL1O75677 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFPL1O75677 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL1O75677 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms