Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 RCC2P6-201ENST00000526625 1557 ntBASIC19.36■□□□□ 0.69
OPHN1O60890 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
OPHN1O60890 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
OPHN1O60890 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.35■□□□□ 0.69
OPHN1O60890 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
OPHN1O60890 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.35■□□□□ 0.69
OPHN1O60890 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.35■□□□□ 0.69
OPHN1O60890 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.35■□□□□ 0.69
OPHN1O60890 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
OPHN1O60890 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.34■□□□□ 0.69
OPHN1O60890 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.34■□□□□ 0.69
OPHN1O60890 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
OPHN1O60890 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.34■□□□□ 0.69
OPHN1O60890 AC004951.3-201ENST00000418645 1148 ntBASIC19.34■□□□□ 0.69
OPHN1O60890 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.34■□□□□ 0.69
OPHN1O60890 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.34■□□□□ 0.69
OPHN1O60890 AC091390.4-202ENST00000476426 537 ntBASIC19.34■□□□□ 0.69
OPHN1O60890 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.34■□□□□ 0.69
OPHN1O60890 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
OPHN1O60890 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.34■□□□□ 0.69
OPHN1O60890 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
OPHN1O60890 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.34■□□□□ 0.69
OPHN1O60890 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.34■□□□□ 0.69
OPHN1O60890 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
OPHN1O60890 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
OPHN1O60890 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
OPHN1O60890 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
OPHN1O60890 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.33■□□□□ 0.69
OPHN1O60890 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
OPHN1O60890 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
OPHN1O60890 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
OPHN1O60890 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
OPHN1O60890 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
OPHN1O60890 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.33■□□□□ 0.69
OPHN1O60890 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
OPHN1O60890 HMGA1P5-201ENST00000412453 271 ntBASIC19.33■□□□□ 0.68
OPHN1O60890 AC011506.1-201ENST00000474329 610 ntBASIC19.33■□□□□ 0.68
OPHN1O60890 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.33■□□□□ 0.68
OPHN1O60890 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.33■□□□□ 0.68
OPHN1O60890 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.33■□□□□ 0.68
OPHN1O60890 FAM87A-204ENST00000613235 858 ntBASIC19.33■□□□□ 0.68
OPHN1O60890 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.33■□□□□ 0.68
OPHN1O60890 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.33■□□□□ 0.68
OPHN1O60890 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
OPHN1O60890 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
OPHN1O60890 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPHN1O60890 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
OPHN1O60890 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
OPHN1O60890 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPHN1O60890 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
OPHN1O60890 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms