Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHL1O00533 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CHL1O00533 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 TNXA-203ENST00000507684 2038 ntBASIC23.79■■□□□ 1.4
CHL1O00533 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.79■■□□□ 1.4
CHL1O00533 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.79■■□□□ 1.4
CHL1O00533 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.79■■□□□ 1.4
CHL1O00533 AC005332.3-201ENST00000589904 676 ntBASIC23.79■■□□□ 1.4
CHL1O00533 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 AL390719.2-201ENST00000606993 987 ntBASIC23.79■■□□□ 1.4
CHL1O00533 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.79■■□□□ 1.4
CHL1O00533 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.79■■□□□ 1.4
CHL1O00533 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHL1O00533 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.78■■□□□ 1.4
CHL1O00533 AC093503.3-201ENST00000624917 2352 ntBASIC23.78■■□□□ 1.4
CHL1O00533 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.78■■□□□ 1.4
CHL1O00533 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.78■■□□□ 1.4
CHL1O00533 IGHGP-201ENST00000390555 1178 ntBASIC23.78■■□□□ 1.4
CHL1O00533 KRT18P48-201ENST00000434763 852 ntBASIC23.78■■□□□ 1.4
CHL1O00533 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.78■■□□□ 1.4
CHL1O00533 AP003733.1-201ENST00000491725 852 ntBASIC23.78■■□□□ 1.4
CHL1O00533 AC069148.1-201ENST00000608741 768 ntBASIC23.78■■□□□ 1.4
CHL1O00533 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.78■■□□□ 1.4
CHL1O00533 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 AC126763.1-201ENST00000552015 2118 ntBASIC23.78■■□□□ 1.4
CHL1O00533 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CHL1O00533 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CHL1O00533 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHL1O00533 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHL1O00533 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHL1O00533 ATP5G2P1-201ENST00000433580 426 ntBASIC23.77■■□□□ 1.4
CHL1O00533 AP002383.4-201ENST00000442518 975 ntBASIC23.77■■□□□ 1.4
CHL1O00533 KRT8P26-201ENST00000534154 1276 ntBASIC23.77■■□□□ 1.4
CHL1O00533 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.77■■□□□ 1.4
CHL1O00533 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHL1O00533 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHL1O00533 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CHL1O00533 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHL1O00533 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.77■■□□□ 1.4
CHL1O00533 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CHL1O00533 Z83836.1-201ENST00000624605 1642 ntBASIC23.77■■□□□ 1.4
CHL1O00533 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CHL1O00533 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.76■■□□□ 1.39
CHL1O00533 TSPY22P-201ENST00000427496 604 ntBASIC23.76■■□□□ 1.39
CHL1O00533 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.76■■□□□ 1.39
CHL1O00533 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CHL1O00533 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CHL1O00533 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CHL1O00533 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.76■■□□□ 1.39
CHL1O00533 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHL1O00533 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHL1O00533 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHL1O00533 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.75■■□□□ 1.39
CHL1O00533 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHL1O00533 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHL1O00533 LINC01126-201ENST00000623515 1646 ntBASIC23.75■■□□□ 1.39
CHL1O00533 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHL1O00533 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms