Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 AL138781.1-201ENST00000566567 1274 ntBASIC17.19■□□□□ 0.34
TNFRSF11BO00300 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 KRT8P45-201ENST00000414328 1447 ntBASIC17.19■□□□□ 0.34
TNFRSF11BO00300 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 LINC00896-202ENST00000609602 2128 ntBASIC17.18■□□□□ 0.34
TNFRSF11BO00300 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 SLC25A6P5-201ENST00000435663 894 ntBASIC17.18■□□□□ 0.34
TNFRSF11BO00300 Z85996.1-201ENST00000494644 937 ntBASIC17.18■□□□□ 0.34
TNFRSF11BO00300 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 KRT8P11-201ENST00000409686 1436 ntBASIC17.18■□□□□ 0.34
TNFRSF11BO00300 KRT8P3-201ENST00000519669 1449 ntBASIC17.18■□□□□ 0.34
TNFRSF11BO00300 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFRSF11BO00300 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TNFRSF11BO00300 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms