Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 AC034232.1-201ENST00000506026 1064 ntBASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 KRT18P56-201ENST00000507275 550 ntBASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 AL136038.3-201ENST00000561909 1096 ntBASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 AC116407.4-201ENST00000623319 1061 ntBASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NPIPA2E9PIF3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 HYMAI.1-201ENST00000620949 238 ntBASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 AP000974.1-201ENST00000623909 2387 ntBASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 BX323043.1-201ENST00000641006 1765 ntBASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA2E9PIF3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms