Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC27.37■■□□□ 1.97
HFM1A2PYH4 AC126763.1-201ENST00000552015 2118 ntBASIC27.37■■□□□ 1.97
HFM1A2PYH4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC27.37■■□□□ 1.97
HFM1A2PYH4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
HFM1A2PYH4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC27.36■■□□□ 1.97
HFM1A2PYH4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 HCG4P8-203ENST00000443049 980 ntBASIC27.36■■□□□ 1.97
HFM1A2PYH4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
HFM1A2PYH4 TPSP2-201ENST00000561760 610 ntBASIC27.36■■□□□ 1.97
HFM1A2PYH4 AL121894.2-201ENST00000602977 491 ntBASIC27.36■■□□□ 1.97
HFM1A2PYH4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC27.36■■□□□ 1.97
HFM1A2PYH4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC27.36■■□□□ 1.97
HFM1A2PYH4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 AC099343.3-201ENST00000605834 2503 ntBASIC27.36■■□□□ 1.97
HFM1A2PYH4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
HFM1A2PYH4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 BX276092.5-203ENST00000456199 560 ntBASIC27.35■■□□□ 1.97
HFM1A2PYH4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 LINC01126-201ENST00000623515 1646 ntBASIC27.35■■□□□ 1.97
HFM1A2PYH4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC27.35■■□□□ 1.97
HFM1A2PYH4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
HFM1A2PYH4 AC093503.3-201ENST00000624917 2352 ntBASIC27.35■■□□□ 1.97
HFM1A2PYH4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HFM1A2PYH4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
HFM1A2PYH4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
HFM1A2PYH4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
HFM1A2PYH4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
HFM1A2PYH4 DUSP5P1-201ENST00000441325 1139 ntBASIC27.34■■□□□ 1.97
HFM1A2PYH4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC27.34■■□□□ 1.97
HFM1A2PYH4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HFM1A2PYH4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HFM1A2PYH4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC27.34■■□□□ 1.97
HFM1A2PYH4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
HFM1A2PYH4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 LINC00167-201ENST00000530583 1419 ntBASIC27.33■■□□□ 1.97
HFM1A2PYH4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC27.33■■□□□ 1.97
HFM1A2PYH4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HFM1A2PYH4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
HFM1A2PYH4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.96
HFM1A2PYH4 DRAXINP1-201ENST00000437611 948 ntBASIC27.33■■□□□ 1.96
HFM1A2PYH4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC27.33■■□□□ 1.96
HFM1A2PYH4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC27.33■■□□□ 1.96
HFM1A2PYH4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
HFM1A2PYH4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC27.33■■□□□ 1.96
HFM1A2PYH4 GXYLT1P4-201ENST00000613576 1192 ntBASIC27.33■■□□□ 1.96
HFM1A2PYH4 AC004263.2-201ENST00000617183 678 ntBASIC27.33■■□□□ 1.96
HFM1A2PYH4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.96
HFM1A2PYH4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms