Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC034236.2-201ENST00000606662 1610 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL031133.1-201ENST00000406807 723 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC112907.2-201ENST00000448639 330 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 RASA4DP-201ENST00000460726 1199 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 SEC1P-202ENST00000473944 940 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC083906.6-201ENST00000641366 219 ntBASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGHV4-28A0A0C4DH34 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.4□□□□□ -0.27
IGHV4-28A0A0C4DH34 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms