Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 AL357033.4-201ENST00000617703 1807 ntBASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 UNC93B4-201ENST00000505679 747 ntBASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 AC093677.2-201ENST00000600169 1863 ntBASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 KRT8P32-201ENST00000512863 1461 ntBASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV5A0A0B4J249 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 REXO1L9P-201ENST00000604264 2108 ntBASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 GNAS-203ENST00000306120 1878 ntBASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV5A0A0B4J249 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms