Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSNK1G3Q9Y6M4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 AC141586.3-201ENST00000562166 1838 ntBASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 DRAXINP1-201ENST00000437611 948 ntBASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1G3Q9Y6M4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CSNK1G3Q9Y6M4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AC009065.1-201ENST00000564055 1225 ntBASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AC111152.3-201ENST00000569699 673 ntBASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 RNF126P1-202ENST00000569893 925 ntBASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 KRT18P1-202ENST00000452408 1331 ntBASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1G3Q9Y6M4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AC006333.2-201ENST00000607957 2099 ntBASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1G3Q9Y6M4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms