Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APPL1Q9UKG1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
APPL1Q9UKG1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.83■□□□□ 0.6
APPL1Q9UKG1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 LIN28AP1-201ENST00000429574 405 ntBASIC18.82■□□□□ 0.6
APPL1Q9UKG1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.82■□□□□ 0.6
APPL1Q9UKG1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ECEL1P2-202ENST00000465689 757 ntBASIC18.82■□□□□ 0.6
APPL1Q9UKG1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 AC010203.1-204ENST00000548782 407 ntBASIC18.82■□□□□ 0.6
APPL1Q9UKG1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPL1Q9UKG1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 AC083906.6-201ENST00000641366 219 ntBASIC18.81■□□□□ 0.6
APPL1Q9UKG1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
APPL1Q9UKG1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.8■□□□□ 0.6
APPL1Q9UKG1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 CCR12P-201ENST00000446203 998 ntBASIC18.8■□□□□ 0.6
APPL1Q9UKG1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.8■□□□□ 0.6
APPL1Q9UKG1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 AL512353.2-201ENST00000448759 1962 ntBASIC18.8■□□□□ 0.6
APPL1Q9UKG1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
APPL1Q9UKG1 AC018470.1-201ENST00000624790 3129 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms