Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 CYP2D8P-201ENST00000433633 1490 ntBASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 AC128688.1-201ENST00000487626 519 ntBASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 AP003041.3-201ENST00000527151 707 ntBASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 AC010947.1-201ENST00000623454 693 ntBASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 AC010653.2-201ENST00000623505 997 ntBASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 AC126763.1-201ENST00000552015 2118 ntBASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 AC008556.1-201ENST00000610908 2040 ntBASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA9Q9UGM1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 AC007663.1-201ENST00000438948 1240 ntBASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA9Q9UGM1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms