Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 CA15P1-201ENST00000481698 905 ntBASIC19.49■□□□□ 0.71
CD248Q9HCU0 YBX1P2-201ENST00000489612 999 ntBASIC19.49■□□□□ 0.71
CD248Q9HCU0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 AC009237.14-201ENST00000609975 1594 ntBASIC19.49■□□□□ 0.71
CD248Q9HCU0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 RNF152P1-201ENST00000397754 604 ntBASIC19.48■□□□□ 0.71
CD248Q9HCU0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 TSPY17P-201ENST00000450329 467 ntBASIC19.48■□□□□ 0.71
CD248Q9HCU0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 CKBP1-201ENST00000565489 1086 ntBASIC19.48■□□□□ 0.71
CD248Q9HCU0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD248Q9HCU0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CD248Q9HCU0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 CROCCP3-202ENST00000420820 1947 ntBASIC19.47■□□□□ 0.71
CD248Q9HCU0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 AL031133.1-201ENST00000406807 723 ntBASIC19.47■□□□□ 0.71
CD248Q9HCU0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.47■□□□□ 0.71
CD248Q9HCU0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 AC141257.4-201ENST00000634557 245 ntBASIC19.47■□□□□ 0.71
CD248Q9HCU0 AC136944.6-201ENST00000634818 245 ntBASIC19.47■□□□□ 0.71
CD248Q9HCU0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.47■□□□□ 0.71
CD248Q9HCU0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD248Q9HCU0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.46■□□□□ 0.71
CD248Q9HCU0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms