Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 AL023806.1-201ENST00000603994 1649 ntBASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNF1Q9H3M0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNF1Q9H3M0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 KRT8P41-201ENST00000533985 1514 ntBASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 AL160286.2-201ENST00000567150 934 ntBASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
KCNF1Q9H3M0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 AC008894.3-201ENST00000624324 3103 ntBASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNF1Q9H3M0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNF1Q9H3M0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms