Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 KRT8P26-201ENST00000534154 1276 ntBASIC19.23■□□□□ 0.67
RNF38Q9H0F5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 MIR3180-1-201ENST00000580374 94 ntBASIC19.23■□□□□ 0.67
RNF38Q9H0F5 MIR3180-3-201ENST00000584616 94 ntBASIC19.23■□□□□ 0.67
RNF38Q9H0F5 CLEC4GP1-201ENST00000596555 870 ntBASIC19.23■□□□□ 0.67
RNF38Q9H0F5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.23■□□□□ 0.67
RNF38Q9H0F5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF38Q9H0F5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 TSPY22P-201ENST00000427496 604 ntBASIC19.22■□□□□ 0.67
RNF38Q9H0F5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 KRT18P41-201ENST00000518924 1277 ntBASIC19.22■□□□□ 0.67
RNF38Q9H0F5 KRT126P-201ENST00000549467 1181 ntBASIC19.22■□□□□ 0.67
RNF38Q9H0F5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF38Q9H0F5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF38Q9H0F5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RNF38Q9H0F5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 AC099343.3-201ENST00000605834 2503 ntBASIC19.2■□□□□ 0.66
RNF38Q9H0F5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 AC092329.2-201ENST00000598402 547 ntBASIC19.2■□□□□ 0.66
RNF38Q9H0F5 AC012313.10-201ENST00000623509 926 ntBASIC19.2■□□□□ 0.66
RNF38Q9H0F5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms