Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.05■□□□□ 0.32
COPS4Q9BT78 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.05■□□□□ 0.32
COPS4Q9BT78 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COPS4Q9BT78 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 YBX1P10-201ENST00000444752 975 ntBASIC17.04■□□□□ 0.32
COPS4Q9BT78 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AC120498.8-201ENST00000614275 531 ntBASIC17.04■□□□□ 0.32
COPS4Q9BT78 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COPS4Q9BT78 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COPS4Q9BT78 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 SLC25A6P5-201ENST00000435663 894 ntBASIC17.03■□□□□ 0.32
COPS4Q9BT78 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.03■□□□□ 0.32
COPS4Q9BT78 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS4Q9BT78 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS4Q9BT78 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COPS4Q9BT78 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPS4Q9BT78 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COPS4Q9BT78 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPS4Q9BT78 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS4Q9BT78 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS4Q9BT78 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms