Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK1Q99986 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
VRK1Q99986 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
VRK1Q99986 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
VRK1Q99986 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 AC135050.7-201ENST00000624508 2218 ntBASIC16.4■□□□□ 0.22
VRK1Q99986 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.4■□□□□ 0.22
VRK1Q99986 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.4■□□□□ 0.22
VRK1Q99986 CROCCP3-202ENST00000420820 1947 ntBASIC16.4■□□□□ 0.22
VRK1Q99986 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
VRK1Q99986 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
VRK1Q99986 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VRK1Q99986 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
VRK1Q99986 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.4■□□□□ 0.22
VRK1Q99986 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VRK1Q99986 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK1Q99986 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.39■□□□□ 0.21
VRK1Q99986 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 TSPY14P-201ENST00000303979 915 ntBASIC16.39■□□□□ 0.21
VRK1Q99986 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
VRK1Q99986 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.39■□□□□ 0.21
VRK1Q99986 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
VRK1Q99986 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.39■□□□□ 0.21
VRK1Q99986 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VRK1Q99986 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK1Q99986 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK1Q99986 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
VRK1Q99986 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 TERF1P1-201ENST00000311003 1181 ntBASIC16.38■□□□□ 0.21
VRK1Q99986 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VRK1Q99986 CCR12P-201ENST00000446203 998 ntBASIC16.38■□□□□ 0.21
VRK1Q99986 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK1Q99986 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VRK1Q99986 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.38■□□□□ 0.21
VRK1Q99986 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.38■□□□□ 0.21
VRK1Q99986 AC116562.4-202ENST00000641738 218 ntBASIC16.38■□□□□ 0.21
VRK1Q99986 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.38■□□□□ 0.21
VRK1Q99986 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VRK1Q99986 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK1Q99986 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.38■□□□□ 0.21
VRK1Q99986 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.38■□□□□ 0.21
VRK1Q99986 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK1Q99986 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK1Q99986 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms