Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP2Q96SN8 AL031008.1-201ENST00000619963 541 ntBASIC21.83■■□□□ 1.09
CDK5RAP2Q96SN8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP2Q96SN8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP2Q96SN8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.83■■□□□ 1.09
CDK5RAP2Q96SN8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CDK5RAP2Q96SN8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 AC246785.2-201ENST00000432512 513 ntBASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 EMBP1-201ENST00000458200 901 ntBASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.83■■□□□ 1.08
CDK5RAP2Q96SN8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP2Q96SN8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 SDHAP2-201ENST00000455183 2001 ntBASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 UNC93B7-201ENST00000509439 705 ntBASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP2Q96SN8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 AC124864.1-201ENST00000623408 392 ntBASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 AL353692.3-201ENST00000407031 1396 ntBASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.8■■□□□ 1.08
CDK5RAP2Q96SN8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 TPM4P1-201ENST00000436100 807 ntBASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 NSUN5P1-202ENST00000421140 1535 ntBASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 NSUN5P2-203ENST00000457352 1529 ntBASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 AC099336.1-202ENST00000602961 463 ntBASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms