Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ODF3Q96PU9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.73□□□□□ -0.21
ODF3Q96PU9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ODF3Q96PU9 KRT8P7-201ENST00000533003 1432 ntBASIC13.73□□□□□ -0.21
ODF3Q96PU9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.72□□□□□ -0.21
ODF3Q96PU9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 SLC25A6P5-201ENST00000435663 894 ntBASIC13.72□□□□□ -0.21
ODF3Q96PU9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 AL355355.2-201ENST00000442321 338 ntBASIC13.72□□□□□ -0.21
ODF3Q96PU9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 AC113410.3-201ENST00000623366 203 ntBASIC13.72□□□□□ -0.21
ODF3Q96PU9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 AC020916.1-201ENST00000587762 1774 ntBASIC13.72□□□□□ -0.21
ODF3Q96PU9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 GPAT2P1-201ENST00000444924 1672 ntBASIC13.72□□□□□ -0.21
ODF3Q96PU9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ODF3Q96PU9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ODF3Q96PU9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 SLC25A1P2-201ENST00000430693 912 ntBASIC13.71□□□□□ -0.21
ODF3Q96PU9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 AC098590.1-201ENST00000468126 897 ntBASIC13.71□□□□□ -0.21
ODF3Q96PU9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 REXO1L10P-201ENST00000615707 1290 ntBASIC13.71□□□□□ -0.21
ODF3Q96PU9 REXO1L12P-201ENST00000622156 912 ntBASIC13.71□□□□□ -0.21
ODF3Q96PU9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ODF3Q96PU9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ODF3Q96PU9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
ODF3Q96PU9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.71□□□□□ -0.22
ODF3Q96PU9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ODF3Q96PU9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
ODF3Q96PU9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ODF3Q96PU9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.71□□□□□ -0.22
ODF3Q96PU9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ODF3Q96PU9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ODF3Q96PU9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms