Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 KRT18P35-201ENST00000510488 1269 ntBASIC19.14■□□□□ 0.65
RPRD1AQ96P16 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPRD1AQ96P16 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 AC104390.1-201ENST00000555663 520 ntBASIC19.13■□□□□ 0.65
RPRD1AQ96P16 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 AL445228.2-201ENST00000605589 952 ntBASIC19.13■□□□□ 0.65
RPRD1AQ96P16 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.13■□□□□ 0.65
RPRD1AQ96P16 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 BX323043.1-201ENST00000641006 1765 ntBASIC19.13■□□□□ 0.65
RPRD1AQ96P16 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPRD1AQ96P16 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 STARP1-201ENST00000397973 869 ntBASIC19.12■□□□□ 0.65
RPRD1AQ96P16 SPDYE15P-201ENST00000424157 909 ntBASIC19.12■□□□□ 0.65
RPRD1AQ96P16 KRT18P38-201ENST00000449496 1282 ntBASIC19.12■□□□□ 0.65
RPRD1AQ96P16 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 AC010240.3-201ENST00000607688 395 ntBASIC19.12■□□□□ 0.65
RPRD1AQ96P16 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPRD1AQ96P16 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 ANO7L1-203ENST00000602586 1720 ntBASIC19.11■□□□□ 0.65
RPRD1AQ96P16 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 AC093525.10-201ENST00000625130 1569 ntBASIC19.11■□□□□ 0.65
RPRD1AQ96P16 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.11■□□□□ 0.65
RPRD1AQ96P16 RASA4DP-201ENST00000460726 1199 ntBASIC19.11■□□□□ 0.65
RPRD1AQ96P16 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 AC087388.1-201ENST00000571370 1112 ntBASIC19.11■□□□□ 0.65
RPRD1AQ96P16 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPRD1AQ96P16 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms