Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.73■□□□□ 0.43
ITCHQ96J02 KRT8P45-201ENST00000414328 1447 ntBASIC17.72■□□□□ 0.43
ITCHQ96J02 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
ITCHQ96J02 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 AC133681.1-201ENST00000465482 601 ntBASIC17.72■□□□□ 0.43
ITCHQ96J02 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.72■□□□□ 0.43
ITCHQ96J02 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.72■□□□□ 0.43
ITCHQ96J02 AC124016.1-201ENST00000609552 612 ntBASIC17.72■□□□□ 0.43
ITCHQ96J02 AC110285.5-201ENST00000611501 352 ntBASIC17.72■□□□□ 0.43
ITCHQ96J02 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ITCHQ96J02 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.72■□□□□ 0.43
ITCHQ96J02 AC067852.2-201ENST00000590513 2313 ntBASIC17.72■□□□□ 0.43
ITCHQ96J02 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ITCHQ96J02 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.72■□□□□ 0.43
ITCHQ96J02 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ITCHQ96J02 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ITCHQ96J02 HLA-L-209ENST00000420110 1011 ntBASIC17.71■□□□□ 0.43
ITCHQ96J02 AP002982.1-201ENST00000492365 877 ntBASIC17.71■□□□□ 0.43
ITCHQ96J02 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.71■□□□□ 0.43
ITCHQ96J02 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ITCHQ96J02 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ITCHQ96J02 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.71■□□□□ 0.43
ITCHQ96J02 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
ITCHQ96J02 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ITCHQ96J02 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.7■□□□□ 0.42
ITCHQ96J02 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ITCHQ96J02 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.7■□□□□ 0.42
ITCHQ96J02 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.7■□□□□ 0.42
ITCHQ96J02 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.7■□□□□ 0.42
ITCHQ96J02 AC091390.4-202ENST00000476426 537 ntBASIC17.7■□□□□ 0.42
ITCHQ96J02 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.7■□□□□ 0.42
ITCHQ96J02 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.7■□□□□ 0.42
ITCHQ96J02 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ITCHQ96J02 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.7■□□□□ 0.42
ITCHQ96J02 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.7■□□□□ 0.42
ITCHQ96J02 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ITCHQ96J02 OR6D1P-202ENST00000641007 5290 ntBASIC17.7■□□□□ 0.42
ITCHQ96J02 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.7■□□□□ 0.42
ITCHQ96J02 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ITCHQ96J02 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ITCHQ96J02 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ITCHQ96J02 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.69■□□□□ 0.42
ITCHQ96J02 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.69■□□□□ 0.42
ITCHQ96J02 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ITCHQ96J02 AC004951.3-201ENST00000418645 1148 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms