Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 AL138781.2-201ENST00000617896 1843 ntBASIC19.14■□□□□ 0.65
IFT43Q96FT9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 KRT18P57-201ENST00000443599 1254 ntBASIC19.13■□□□□ 0.65
IFT43Q96FT9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.13■□□□□ 0.65
IFT43Q96FT9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.13■□□□□ 0.65
IFT43Q96FT9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFT43Q96FT9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 ARMC10P1-201ENST00000313754 855 ntBASIC19.12■□□□□ 0.65
IFT43Q96FT9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFT43Q96FT9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.12■□□□□ 0.65
IFT43Q96FT9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 SLC25A1P2-201ENST00000430693 912 ntBASIC19.11■□□□□ 0.65
IFT43Q96FT9 ATP5G1P1-201ENST00000448724 379 ntBASIC19.11■□□□□ 0.65
IFT43Q96FT9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms