Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ECHDC3Q96DC8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 AL391807.1-203ENST00000604392 2365 ntBASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 ZNF444P1-201ENST00000559497 298 ntBASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 AL136038.4-201ENST00000603606 1261 ntBASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC3Q96DC8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 MIR149-201ENST00000384879 89 ntBASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 FAM86EP-206ENST00000510506 987 ntBASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 AL136038.3-201ENST00000561909 1096 ntBASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC3Q96DC8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 AC093503.3-201ENST00000624917 2352 ntBASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms